Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
1Z0J Chain:B ((9-59))
-------------------------------IEEELLLQQIDNIKAYIFDAKQCGRLDEVEVLTENLRELKHTLAKQKGGTD------------
General information:
TITO was launched using:
RESULT:
Template:
1Z0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1252 for 266 contacts (-4.7/contact) +
2D Compatibility (PS) -5996 + (NN) -8109 + (LL) 2704
1D Compatibility (HY) -800 + (ID) 450
Total energy: -13903.0 ( -52.27 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1Z0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z0J-query.scw
PDB file :
Tito_Scwrl_1Z0J.pdb
: