Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILKTLQKHLGDVETSDFKTNAIEKSQQIAKFSRDMKNINESVGALQVLQIACKKLLNKSMGLEDKDA----------------LQASIIKQELREIVENCQFLASPLFDTQ---LNIAINDEVFSMIVDNPLNLLENVGGFQAYLEEKLNEIKELLGYLSESLSNPKAFMPKQSFSNKSLKDLLSDDLRA |
3K8W Chain:A ((44-151)) | --------------DAAGLAISD-RMTAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTINGVDVGKIDAASTAQERAAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1048 for 459 contacts (-2.3/contact) +
2D Compatibility (PS) -9664 + (NN) -5367 + (LL) 1356
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -16573.0 ( -36.11 by residue)
QMean score : 0.500
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