Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDILKTLQKHLGDVETSDFKTNAIEKSQQIAKFSRDMKNINESVGALQVLQIACKKLLNKSMGLEDKDA----------------LQASIIKQELREIVENCQFLASPLFDTQ---LNIAINDEVFSMIVDNPLNLLENVGGFQAYLEEKLNEIKELLGYLSESLSNPKAFMPKQSFSNKSLKDLLSDDLRA
3K8W Chain:A ((44-151))--------------DAAGLAISD-RMTAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTINGVDVGKIDAASTAQERAAQ


General information:
TITO was launched using:
RESULT:

Template: 3K8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1048 for 459 contacts (-2.3/contact) +
2D Compatibility (PS) -9664 + (NN) -5367 + (LL) 1356
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -16573.0 ( -36.11 by residue)
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3K8W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K8W-query.scw
PDB file : Tito_Scwrl_3K8W.pdb: