Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANERSKLAFKKTFPVFKRFLQSKDLALVVFVIAILAIIIVPLPPFVLDFLLTISIALSVLIILIGLYIDKPTDFSAFPTLLLIVTLYRLALNVATTRMILTQGYKGPSAVSDIITAFGEFSVSGNYVIGAIIFSILVLVNLLVVTNGSTRVTEVRARFALDAMPGKQMAIDADLNSGLIDDKEAKKRRAALSQEADFYGAMDGASKFVKGDAIASIIITLINIIGGFLVGVFQRD---------MSLSFSASTF-T-ILT-IGDGLVGQI-PALIIATATGIVATRTTQNEE-----------EDFASKLITQLTNKSK-----TLVIVGANLLLFATI----PGLPTFS-LAFVGTLFLFI-AWLISREGKDGLLTKLENY-----LSQKFGLDLSEKPHSS-KIKPHAPTTKTKTPEEIKREEEQAIDEVLKIEFLE-LALGYQLISLADMKQG-GDLLERIRGIRKKIASDYGFLMPQIRIRDNLQLPPTHYEIKLKGI-VIGEGMVMPDKFLAMNTGFVNREIEGIPTKE-PAFGMDALWIDAKNKEEAIIQGYTIIDPSTVIATHTSELVKKYAEDFITKDEVKSLLERLAKDYPTIVEESKKIPTGAIRSVLQALLHEKIPIKDMLTILETITDIAPLVQNDVNILTEQVRARLSRVITNAFKSEDGRLKFLTFSTDSEQFLLNKLRENGTSKSLLLNVGELQKLIEGVSEEAMKVLQKGIAPVILIVEPNLRKALSNQMEQARIDVVVLSHAELDPNSNFEALGTIHINF |
| 4W9R Chain:A ((4-363)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAETLMEPVVSMVRYYEQFGEMPKCIVVGVYEPKQEDVTVVEEVGRPINESARFFEFVSAELVPYIQGKYPIADLKGVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMGEEFSHALAAGVPNRLFYYMATADVENKVVYDKAIQFERAMRSAPVHESVEYHFVDFKGSSVNAAKLQGIA-QALDMCFDIYKPIGGKEFKTQMETLET---GIYEYLENKYNTIYKQLGVK---------KVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNF-FLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27792 for 2171 contacts (-12.8/contact) +
2D Compatibility (PS) -31178 + (NN) 1631 + (LL) 34616
1D Compatibility (HY) 16800 + (ID) 1150
Total energy: -7073.0 ( -3.26 by residue)
QMean score : 0.028
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