Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIA-QNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVL-WSENL------KMDSLEILKDPKIKRIAMANPKLAPYGKASMEV-------LDRLKLTPSL---------------------------K---SKIIYGASISQAHQFIATKNAQIGFGALSLIDKKDKNLSYFIIDKTL-------------------------YNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3K6V Chain:A ((43-333)) | ---------------------EVLTVFHAGSLSVPFEELEAEFEAQHPGVDVQREAAGSAQSVRKITELGKKADVLASADYALIPSLMVPEYAD-WYAAFARNQMILAYTNESKYGDEINTDNWYEILRRPDVRYGFSNPNDDPAGYRSQMVTQLAESYYNDDMIYDDLMLANTGMTLTTEENGTALIHVPASEEISPNTSKIMLRSMEVELSSALETGEIDYLYIYRSVAEQ--HGFEYVALPPAIDLSSLEYADNYSKVQVEMVNGEVVTGSPIVYGVTIPNNAENSELATEFVALLLGETGQQIFIENGQPPI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111316 for 1741 contacts (-63.9/contact) +
2D Compatibility (PS) -23748 + (NN) -11055 + (LL) 2616
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -154603.0 ( -88.80 by residue)
QMean score : 0.591
|
|
|