Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHV-GIENYTLLDTACGNKEFLKLHHP----------KKIGADIDPKCDALIINALAN--PKR-----ENYGI-SQDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFL-KSFAILKPAF-ICVLHPLSYLIKEANFKQLK-LFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
| 2F8L Chain:A ((103-307)) | -------------IQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKT----FE--LCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS-DFAKVDKFIKKNGHIEGIIKLPETLFKS-QA-RKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92217 for 1407 contacts (-65.5/contact) +
2D Compatibility (PS) -19496 + (NN) -12779 + (LL) 8060
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -126732.0 ( -90.07 by residue)
QMean score : 0.424
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