Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVGVYGASGRIGKLLLEELKGGYKGLELSSVFVRQKCETDFSSFSHAPLVTNDLKAF--VKACECVVDFSLPKGVDHLLDVLLECPKILVSGTTGLEKETLEKMQKLALKAPLLHAHNMSIGIMMLNQLAFLTSLK--LKDADIEIVETHHNLKKDAPSGTALSLYETCTKARGYDEKNALITHREGLRSKESIGIATLRGGDVAGKHTIGFYLEGEYIELSHTATNRSIFAKGALEVALWLKDKAAKKYEISE-MFG
1VM6 Chain:D ((13-225))MKYGIVGYSGRMG----------------------QEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKR--FLSELVKVLEDWDVEIVETHHRFKKDAPSGTAILLESALGK---------------------SVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAISRTVFAIGALKAAEFLVGKDPGMYSFEEVIF-


General information:
TITO was launched using:
RESULT:

Template: 1VM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123880 for 1703 contacts (-72.7/contact) +
2D Compatibility (PS) -22482 + (NN) -9439 + (LL) 3088
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -176263.0 ( -103.50 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_1VM6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VM6-query.scw
PDB file : Tito_Scwrl_1VM6.pdb: