Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYD--G---MSFNAFKEYKKRVFAKNEKKNIAFSSINVIP-YPNSQNKRLFYVVFDQDYKA--YQQNKLSYSSNSQKELYVEIE-NNQASIIMEK |
| 3D9R Chain:A ((6-128)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNEELAVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETV-GFDMAYEIKEVVQTSA-----DWAFVRSATEGTETNKATG-VVTPAAYQELFLLRKSATGSWQTARYC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34896 for 769 contacts (-45.4/contact) +
2D Compatibility (PS) -12551 + (NN) -3940 + (LL) 13144
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -42993.0 ( -55.91 by residue)
QMean score : 0.503
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