Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLV-----------KNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLD-EIFSTTSPSANNKIGQEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSS--PELLLTYMKINPLDQKTAEQQCGISDKVLVL---YCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKN------------KNFIKGIKKLMLAHNKVFLNYLEELDALER---------SLEQSKRQYLQERQSSKIIVK |
| 2GGS Chain:A ((1-273)) | MRTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQDDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRKTGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2567 for 1765 contacts (-1.5/contact) +
2D Compatibility (PS) -24508 + (NN) -838 + (LL) -16
1D Compatibility (HY) 1200 + (ID) 1400
Total energy: -28129.0 ( -15.94 by residue)
QMean score : 0.242
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