Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
2JFX Chain:B ((1-255))
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYAL-------PKVEFHASGDVIWLERQAKEWLKL
General information:
TITO was launched using:
RESULT:
Template:
2JFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -287575 for 2457 contacts (-117.0/contact) +
2D Compatibility (PS) -26408 + (NN) -10935 + (LL) 288
1D Compatibility (HY) -40400 + (ID) 12350
Total energy: -377380.0 ( -153.59 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2JFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JFX-query.scw
PDB file :
Tito_Scwrl_2JFX.pdb
: