Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLENRVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRFKLAGADLVRVAVSNEKDALALKELKKV-----SPLPLIADIHFHYKFALIA----AQSVDAIRINPGNIGSKDK-----IKAVVDACKEKNIPIRIGVNAGSLEKQF-----DQKYG-PTPK--------GMVESAL--YNAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVIYPFHLGVTEAGNLFSSSIKSAMALGGLLMEGIGDTMRVSITGELEN----EIKVARAILRHSGRLKEGINWISCPTCGRIEANLV-DMASKVEKRLS------HIKTP----LDISVMGCVVNALGEAKHADMAIAFGNRS----GLIIKEGKVIHKLAEKDLFETFVIEVENLAKEREKSLKD |
2Y0F Chain:B ((5-401)) | ----RRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPG------EHFAEMIRIAMDLGK----PVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVKTRFAPKA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162520 for 2634 contacts (-61.7/contact) +
2D Compatibility (PS) -36939 + (NN) -18380 + (LL) 716
1D Compatibility (HY) -22000 + (ID) 6700
Total energy: -245823.0 ( -93.33 by residue)
QMean score : 0.497
|
|
|