Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKNSGNIHMYHQDNTILKDKTRFCFETF---GF--LVEAEVEEFELKDAILRLAWRGWNEAKGDEYLEVYHAWLVEKLDNDRVRILTQESQSGVPAKALAKSVPNAMLNGHQAWLDGLVAYSR
1XUV Chain:A ((21-166))
------------------KQEIIITR-EFDAPRELVFKAFTDPDLYTQWIGPRG-FTTAL-KIFEPKNGGSWQYIQKDPEGNEYAFHGVNHDVTE---PERIISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSVFQTIEDR--DGMLQSGMEEGINDSYERLDELLE
General information:
TITO was launched using:
RESULT:
Template:
1XUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27889 for 937 contacts (-29.8/contact) +
2D Compatibility (PS) -14931 + (NN) -1505 + (LL) 1932
1D Compatibility (HY) 4800 + (ID) 550
Total energy: -38143.0 ( -40.71 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1XUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XUV-query.scw
PDB file :
Tito_Scwrl_1XUV.pdb
: