Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKE-NALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHEYPSVLKQMTSLYQKYQCSIVAIEEVVLEEVSKYGVIRGEWLEERVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFDILRETKPGKNNEIQITDALLTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL |
2UX8 Chain:E ((14-281)) | -LRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARGKSLDVLDGTR--LKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQ--PGCLKQMVDAYNKVGGNLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQ--------QLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174703 for 2082 contacts (-83.9/contact) +
2D Compatibility (PS) -27994 + (NN) -4088 + (LL) 492
1D Compatibility (HY) -22400 + (ID) 5950
Total energy: -234643.0 ( -112.70 by residue)
QMean score : 0.507
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