Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGLFVAPVLAIL--GAISADEMEKKRDDAKAYYSQVEVAVKKADVVIDNLQAVKKMADLFTRQITKFDALFFLLSQDAIATMKKHHYDTSRYNQKEKDQLCVTVSTLFSLSAFLKAPIMDKHQKLNKKAQKALNLMRDQMD-----SLENGNYSLDGIRFRQAQLKDLRDDKTS
3L9F Chain:A ((35-204))MQ--GKDIILGILSKKERSGYEINDILQNQLSYFYDGTY--GMIYPTLRKLEKDGKITKEVVIQDGRPNKNIYAITESGKKELASYLQSDVN-DEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKGELTPTQEITIKYGLAQYKSTKKVLEEELAK


General information:
TITO was launched using:
RESULT:

Template: 3L9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26614 for 989 contacts (-26.9/contact) +
2D Compatibility (PS) -17261 + (NN) -3625 + (LL) 432
1D Compatibility (HY) -800 + (ID) 900
Total energy: -48768.0 ( -49.31 by residue)
QMean score : 0.363

(partial model without unconserved sides chains):
PDB file : Tito_3L9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9F-query.scw
PDB file : Tito_Scwrl_3L9F.pdb: