Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEYHIHNLDCPDCAAKLERDLNKLDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEAAEKPLSFTPLIATIAVFLGAILILHLEPSPFIEKAVFVVLALVYLISGKDVILGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIMVFYSAGEFLQILAIARSKKSLKALVDVAPNLAYLKKGDTLVSVAPEDLRINDIVVVKVGEKVPVDGVVIKGESLLDERALSGESMPVNVSERSKVLGGSLNLKAVLEIQVEKLYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVLPPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQTKSIAFDKTGTLTKGVFKVVDIVPQNGHSKEEVLHYASCSQLLSTHPIALSIQK-ACEEMLKDDKHQHDIKNYEELSGMGVKAQCHTDLIIAGNEKMLDQFHIAHSPSPENGTIVHVAFNQTYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRKSATESIARTLGC-EYHASLLPEEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLSSLVKVLAIAKKTKSIIWQNILFALGIKAVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRTMRA |
| 2YJ4 Chain:B ((12-253)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGMIIKNSNVYEKIKEIDTIIFNKTGTLTYGTPIVTQFI---GDSLS--LAYAASVEALSSHPIAKAIVKYAKEQGVK----ILEVKDFKEISGIGVRGKISDKII--------------EVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLK-IIILSGDKEDKVKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNK-VLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNR-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101375 for 2023 contacts (-50.1/contact) +
2D Compatibility (PS) -25228 + (NN) -5724 + (LL) 36324
1D Compatibility (HY) -18400 + (ID) 4150
Total energy: -118553.0 ( -58.60 by residue)
QMean score : 0.420
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