Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKI-FLSCKSLLIQRSLEFYLS-------DCLSPVEVCDLVLSDDEKLETNKPLCFIEERLRKPFTKQSVKEDIKNFYRALKISEKPCEEIQFSKEQKIKQLLEEYTHKLCQIISQ
2YWQ Chain:A ((1-63))
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAG-------KARAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFR--------------------
General information:
TITO was launched using:
RESULT:
Template:
2YWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20371 for 229 contacts (-89.0/contact) +
2D Compatibility (PS) -5048 + (NN) -770 + (LL) 1684
1D Compatibility (HY) 400 + (ID) 200
Total energy: -24305.0 ( -106.14 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_2YWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YWQ-query.scw
PDB file :
Tito_Scwrl_2YWQ.pdb
: