Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCF-LVKSLKPSQLTLM-----LTGFLGGFSFLTTGFW
2UV4 Chain:A ((8-150))
HEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNN---------LDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL
General information:
TITO was launched using:
RESULT:
Template:
2UV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87830 for 918 contacts (-95.7/contact) +
2D Compatibility (PS) -13234 + (NN) -6983 + (LL) 692
1D Compatibility (HY) -7600 + (ID) 550
Total energy: -115505.0 ( -125.82 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2UV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UV4-query.scw
PDB file :
Tito_Scwrl_2UV4.pdb
: