Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIYSGNSIRYNKYLPVGSHHLTTDLSHMLNTP-FPYAEEVKIKYGDLSFESGAE-TPSQSVQ-----IPT--------T--GSDGHESHIVPLSEIQTIM-----RERALETFKIIHRSIQDSGFEEHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPVEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF |
| 2D0O Chain:A ((372-606)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNI--RDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI--------RGSEGPRNAVATGLILSWHKEF---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70156 for 1593 contacts (-44.0/contact) +
2D Compatibility (PS) -23388 + (NN) -13846 + (LL) 16468
1D Compatibility (HY) -2400 + (ID) 1850
Total energy: -95172.0 ( -59.74 by residue)
QMean score : 0.391
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