Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTIDFTFCEINPKKGFGGANGNKISLFYNN-ELYMVKFPP---KPSTHKE-MSYTNGCFSEYVACHIVNSLGLKVQETLLGTYKNKIVVACKDFTTHQYELVDFLSLKNTMIELEKSGKDTNLNDVLYAIDNQHFIEPKVLKCFF-WDMFVADTLLGNFDRHNGNWGFLRASNSKEYQIAPIFDCGSCLYPQADDVVCQKVLSNIDELNARIYNFPQSILKDDNDKKINYYDFLTQTNNKDCLDALLRIYPRIDMNKIHSI-IDNTPFMSEIHKEFLHT-ML-DERKSKIIDVAHTRAIELSLQHKQA-HSNPYDNADDLDNSNEYTPTPKR-RR |
| 2EYU Chain:A ((6-251)) | -PEFKKL-----------GLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQT-------------------------KSYHIITIEDPIEYVFK-----HKKSIVNQREVGEDTKSFADALRAALRE---DPDVIFVGEMRDLETVETALRAAETGHLVFGTLH-TNTAIDTIHRIVD----IFPLNQQEQVRIVLSFI-----LQGIISQRLLPKIGGGRVLAYGLLIPN------TAIRNLIRENKLQQVYSLMQSGQA---------ETGMQTMN-------QTLYKLYKQGLITLEDAMEASPDPKELE------------RMIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27263 for 1893 contacts (-14.4/contact) +
2D Compatibility (PS) -24456 + (NN) -4596 + (LL) 5496
1D Compatibility (HY) -4400 + (ID) 2100
Total energy: -57319.0 ( -30.28 by residue)
QMean score : 0.212
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