Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHTLIERLEKVTNSKELEEARLNALGKKGVFADKFNQLKNLNGEEKNAFAKEIHHYKQAFEKAFELKKKAIMELELEERLKKEKIDVSLFNAIKT-SSSHPLNYTKNKIIEFFTPLGYKLEIGSLVEDDFHNFSALNLPPYHPARDMQDTFYFKDHKLLRTHTSPVQIHTMQEQTPPIKMICLGETFRCDYDLTHTPMFHQIEGLVVDQKGNIRFTHLKGVIEDFLHYFFG-GVKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEAIGYEN--VSGFAFGMGIERLAMLTCQINDLRSFFETDLRVLESF |
3PCO Chain:A ((86-326)) | ------------------------------------------------------------------------------RLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDT--NISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGK-----------NGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168101 for 1866 contacts (-90.1/contact) +
2D Compatibility (PS) -24766 + (NN) -4465 + (LL) 7512
1D Compatibility (HY) -25200 + (ID) 6600
Total energy: -221620.0 ( -118.77 by residue)
QMean score : 0.329
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