Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI---E--CVEVLRCE------DFESLSDAVRFYLSKCKES--LKLHPIYGSFAVATPIMGDFV---Q---MT-N--N-HWT-FSIET-TRQCL---NL--KKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDD-LEI---------LV---WQ-YARSKFNHVSAERFLSGSGLVLIYEALSKRKGL-----------------EKV--AKLSK------AELTPQIISER------ALNGDY-----PICRLTLDTFCSMLGTLAADVALTLGARGGVY--LCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 1BDG Chain:A ((66-447)) | ----ETGNFLALDLGGTNYRVLSVTLE-G-GKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED--------------PKCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHP-GKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVE-PIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRS-EVTVGVDGSLYKFHPK-FCE-RMTDMVDKLK--PK-NTRFCL--RLSEDGSGKGAAAIAASC------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135423 for 2396 contacts (-56.5/contact) +
2D Compatibility (PS) -31673 + (NN) -5977 + (LL) 2300
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -178473.0 ( -74.49 by residue)
QMean score : 0.293
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