Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFLKKSLCALLISGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRW-WNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGG---------QLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQ-WPNGYPYFSQK-DNPQGGEIGKYSNPTILDRVYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYLYKNKWLSVRADAFFSFVGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
3WL8 Chain:A ((23-358)) | ----VKWECP---AGYEVKEGLNV-DFPHKGMKRAFIVYPAKNVSGP--------APVWVPMTGSVESTNDNLTVARSGANSILADHGY---------------------TVIAPVRACANQ-------------DPNIRGERCNGPG---SNGWNWNPWFEGRAADPSGEHWKNDEGPDSSFFVAMVQCVGTKYKLDARRLFLGGIASGGTMTNRALLF---RSNFWAGGLPISGEWYVTSDDGTPLSFDDARAAVAAAPTKIHQGRVGPYPLPAKVGP-------------------LIVMTVWGGEKDLWNCTRP-------------DGSRFLCADYRPSTQAGSNFFSAQPDVVHVACSST----------------------HGHMWPQLNTQEFNRWALDTLASHPKGSDPRSFKLTQPPEGYTCHVGPFTGLYASAWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85213 for 2838 contacts (-30.0/contact) +
2D Compatibility (PS) -33007 + (NN) -3152 + (LL) 8700
1D Compatibility (HY) -3600 + (ID) 3300
Total energy: -119572.0 ( -42.13 by residue)
QMean score : 0.251
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