Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLN--MEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK
1PD3 Chain:A ((63-116))--------------------------------------------------GKWREQLGQKFEEIRWLIEEVRHRLKITENSFEQITFM-QALQLLLEVEQEIRTF------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9027 for 246 contacts (36.7/contact) +
2D Compatibility (PS) -5483 + (NN) -2509 + (LL) 6828
1D Compatibility (HY) -5600 + (ID) 500
Total energy: 1763.0 ( 7.17 by residue)
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_1PD3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PD3-query.scw
PDB file : Tito_Scwrl_1PD3.pdb: