Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLN--MEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK |
1PD3 Chain:A ((63-116)) | --------------------------------------------------GKWREQLGQKFEEIRWLIEEVRHRLKITENSFEQITFM-QALQLLLEVEQEIRTF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9027 for 246 contacts (36.7/contact) +
2D Compatibility (PS) -5483 + (NN) -2509 + (LL) 6828
1D Compatibility (HY) -5600 + (ID) 500
Total energy: 1763.0 ( 7.17 by residue)
QMean score : 0.387
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