Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKLVK |
2HQS Chain:C ((8-105)) | ---------------------------------------------------------------------------VYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 462 for 669 contacts (0.7/contact) +
2D Compatibility (PS) -10424 + (NN) -5716 + (LL) 5324
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -16654.0 ( -24.89 by residue)
QMean score : 0.481
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