Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTP-LESD---FLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEK-D-KG-EQRQKEGELIKAFDLPLSLIERTQEC
1TVI Chain:A ((1-141))
MIRILGEGKGSKLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLME--EDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGEWRSNPSEDSD
General information:
TITO was launched using:
RESULT:
Template:
1TVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50306 for 993 contacts (-50.7/contact) +
2D Compatibility (PS) -14902 + (NN) -8444 + (LL) 64
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -83938.0 ( -84.53 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1TVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVI-query.scw
PDB file :
Tito_Scwrl_1TVI.pdb
: