Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MREIVWVHSQR---------------------IAPYKTLILNELHYYPLESDLTPFNALIFTSKNAVFSLLETLN--------NSPKLKMLQNIPAYALSEPTAKTLQDHHFKTAFIGKKAHGKEFAKEILP-LLEKKSVLYLRAKEIASSLDTILLEHGINLQQAVVYENKLKHLTLSEQNALKPQEK--SVLIFTAISHAKAFLHYFEFL-----KSYTAISIGNTTAHYLQEQGIQ-SYTAQKPSLESCLELALNLKS |
| 1JR2 Chain:A ((1-260)) | MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG-NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKALQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120881 for 1657 contacts (-73.0/contact) +
2D Compatibility (PS) -23858 + (NN) -2844 + (LL) 144
1D Compatibility (HY) -2800 + (ID) 2150
Total energy: -152389.0 ( -91.97 by residue)
QMean score : 0.533
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