Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLESRIK--NEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQ-NDQNALILGAGGSAKALACGLQKQGLKVSVLNRS-ARGLDFFQRLGCDCFMEPPK--SAFDLIINATSASLHNELP--LNKEVLKGYFKESKLAYDLAYGFLTPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF |
| 2HK9 Chain:B ((15-273)) | -----YGVIGFPVKHSLSPVFQNALI----RYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLI----KKDHVVVDIIYK-ETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147671 for 2108 contacts (-70.1/contact) +
2D Compatibility (PS) -26489 + (NN) -6714 + (LL) 1344
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -203430.0 ( -96.50 by residue)
QMean score : 0.413
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