Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW
2R0Q Chain:C ((162-200))
------------------------------------------------------------------------------------------------------------------------------RVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG---
General information:
TITO was launched using:
RESULT:
Template:
2R0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10838 for 223 contacts (-48.6/contact) +
2D Compatibility (PS) -4092 + (NN) -1132 + (LL) 10908
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -8504.0 ( -38.13 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_2R0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R0Q-query.scw
PDB file :
Tito_Scwrl_2R0Q.pdb
: