Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE |
| 1J4W Chain:A ((5-36)) | --------------------------------------------------------------------------------------------------------------------------------------------IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRSVQQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6881 for 143 contacts (-48.1/contact) +
2D Compatibility (PS) -3320 + (NN) 190 + (LL) 10316
1D Compatibility (HY) -800 + (ID) 300
Total energy: -795.0 ( -5.56 by residue)
QMean score : 0.335
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