Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRATAIKIFSFSSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQEAQKACLGVALPPYGAGAPTYAVRFTILSFSLLEKENSTYRAEFALGYDISVKGDSHSGVIIKHENISSLENKTTKTSKNGSQDFQESAIQSLQHVSTQAMQEAISLIKKAVEAQSVSPLKK |
| 1K8K Chain:F ((2-167)) | ----TATLRPYLSAVRATLQAALCLE-------------NFSSQVVERHNKPEVEVRS----SKELLLQPVTISR-------NEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFIL------------RRKPVEGYDISF--------LITNFHTEQMY----------KHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47714 for 1137 contacts (-42.0/contact) +
2D Compatibility (PS) -17060 + (NN) 1839 + (LL) 3256
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -64479.0 ( -56.71 by residue)
QMean score : 0.238
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