Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITKAKNLGEWLDMRLGTNNLV-KVLMTEYWIPKNINFLWAMGVILLTLLGVLVISGIFLLMYYKPDAKMAFDSVNFTIMQEVAYGWLWRHMHATAASMIFVIIYIHMFVGIYYGSYKKGREMIWISGMILFVVFSAEAFSGYMLPWGQMSYWAAAVITNLFGGIPFIGADVVEWIRGNYVVADSTLTRFFMLHVFLLPIAIILLVGVHFYSLRILHVNNQEGEEIDFELEEKKFIEGKKKESKVIPFWPVFLSKDIFVVCTFMVFFFYLVCYQYDFAMDPINFERGNSLKTPPHIYPEWYFLWSYEVLRGFFFSADL------GLMAFGVAQVIFF-------------LLPFLDRSPVVAPAHKRPAFMVWFWLLIIDMIVLTIYGKLPPLGIGKYIGLFGSITFLALFFVVLPIITIAERKKQGGVR |
| 2FYN Chain:P ((17-417)) | -----------KWLHSRLPIVALAYDTIMIP--TPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEH-IMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLH-YLLPFVIAALVAIHIWAFHSTGNNNPTGVEV-------RRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRA--FTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRS-GRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310274 for 2817 contacts (-110.1/contact) +
2D Compatibility (PS) -38485 + (NN) -15670 + (LL) 2132
1D Compatibility (HY) -45600 + (ID) 7900
Total energy: -415797.0 ( -147.60 by residue)
QMean score : 0.300
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