Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLG-SFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQE----KTIVEVMEDIDAQAKALEV--DASKKLAKMQETLDFIKERLKNVKKKKGVELFH---KANKISGHQALDSDILEKGGIDNFGLKYV-KFGRADISVEKIVKENPEIIFIWWISPL------SPEDVLNNPKFSTIKAIKNKQVYKLPTMDI-GGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3TEF Chain:A ((51-329)) | -------------------------------ETVTIEHRLGKTTLEQKPQRVVVIGVGALDAIDSFGIE--PVAVSKFDGTPDYLAK-Y-KSDKYPSAGS--LFEPDFETIYTQKPDLIVIGPRASKSYDELSKI-APTIVFAAEADQGYWESTQQQWRNLGKVFAIEPAVEAKIEQVDAQFKSIMQYNQQ--HKSDAMLVMSSGGNLTTFGANSRFSSVYKDFGFSETVPVSKESSHGDLISFEYIREHNPKTLLVVDRDKVVTKGETNIRQTFENDLVKATTAYKNGHIAYLDVNAWYIAISGVKATEQMVADMKAS-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106356 for 2217 contacts (-48.0/contact) +
2D Compatibility (PS) -27866 + (NN) -14926 + (LL) 5568
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -149730.0 ( -67.54 by residue)
QMean score : 0.475
|
|
|