Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYT--FVDLETAITTRTKKVPYQE-FWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDE----AYQL-KVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPV---DYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 1HP1 Chain:A ((4-234)) | -----------------------------------------------------DKTYKITVLHTNDHHGHFWRNE----Y-GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIG-NHEFDNPLTVLRQQE---KWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDT-AKIGNPEYFTDIEFRKPADEAKLVIQE-LQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGS-LAMIVGGHSQDPVCM--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48684 for 1808 contacts (-26.9/contact) +
2D Compatibility (PS) -23090 + (NN) -6220 + (LL) 8668
1D Compatibility (HY) 1600 + (ID) 1100
Total energy: -68826.0 ( -38.07 by residue)
QMean score : 0.352
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