Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
2BPS Chain:A ((-1-79))
---GSYIDITIDLKHYNGSVFDLRLSDYHPVKKVIDIAWQAQSVSMPPREGHWIRVVNKDKVFSGECKLSDCGITNGDRLEIL
General information:
TITO was launched using:
RESULT:
Template:
2BPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49920 for 573 contacts (-87.1/contact) +
2D Compatibility (PS) -8369 + (NN) -1504 + (LL) 384
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -66109.0 ( -115.37 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2BPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BPS-query.scw
PDB file :
Tito_Scwrl_2BPS.pdb
: