Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
1WA8 Chain:B ((601-695))
MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLA-AAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFA---
General information:
TITO was launched using:
RESULT:
Template:
1WA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17453 for 570 contacts (30.6/contact) +
2D Compatibility (PS) -9913 + (NN) -4233 + (LL) 168
1D Compatibility (HY) 400 + (ID) 550
Total energy: 3325.0 ( 5.83 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1WA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA8-query.scw
PDB file :
Tito_Scwrl_1WA8.pdb
: