Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPP--EADYLNDETLEVYENDKKKYDQTNQL-ITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
2I9F Chain:A ((6-64))
HHHEPGDLRHDLNQQERATLSSNVQRF-----FMIGHGSLTADAGGLTYTVS------WVPTKQIQRKVA
General information:
TITO was launched using:
RESULT:
Template:
2I9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1916 for 263 contacts (7.3/contact) +
2D Compatibility (PS) -5703 + (NN) -1198 + (LL) 636
1D Compatibility (HY) 800 + (ID) 600
Total energy: -4149.0 ( -15.78 by residue)
QMean score : 0.108
(partial model without unconserved sides chains):
PDB file :
Tito_2I9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9F-query.scw
PDB file :
Tito_Scwrl_2I9F.pdb
: