Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYI-GSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
1WRJ Chain:A ((1-150)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIVYGLYKSPFGPITVAKNEKGFVMLDFCDCAER----S-----------SLDNDYFTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKT--SPRAVGTALSKNNVLLIIPCHRVIGEK-SLGGYSRGVELKRKLLELEGIDV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WRJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -68246 for 1143 contacts (-59.7/contact) +
2D Compatibility (PS) -15846 + (NN) -4164 + (LL) 11836
1D Compatibility (HY) -14800 + (ID) 2050
Total energy: -93270.0 ( -81.60 by residue)
QMean score : 0.493
|
|
|