Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNII-YSGHQPKEAAKEWNAEFVSQKELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGED--FAKLDNVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
1WWK Chain:B ((5-305)) | ---KVLVAAPLHEKAIQVLKDAGLEVIY-EEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGV-----WAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEP-LPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKIL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227546 for 2479 contacts (-91.8/contact) +
2D Compatibility (PS) -32798 + (NN) -16473 + (LL) 1060
1D Compatibility (HY) -28000 + (ID) 7250
Total energy: -311007.0 ( -125.46 by residue)
QMean score : 0.541
|
|
|