Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MEKMIQTIIL------YSVFAVGFLYLLHFTLRKLENI--LTSFFYEVSQDQSLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQK-------------EVLFLEEIDQLIAQNKSYEQQLQAWENEQPKQIIEVPTFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIR---EFDALVRTEKIRCALPY-----KVI---LHLFEMYSPEQLHLFAQSFQRYSERSSKLPVKQIYQSSYLSPEQKLKVMQEEG---TLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVYNIHFYRGLIC-IHVASKG---SANHFEKLWQPAHRSYKIEYQVQKELIGGVIIQYGSKSIDMSYQELIKRSTEKMEAEVKL------------ |
| 4CVH Chain:A ((1-411)) | SMHPQAVAAVLPAGPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALDQCYNFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQ--IREFAKEVKERNILLYGLLISYPQD--DQKLQESLRQGAIIIASLIKERNSGLIGQLLIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55501 for 2583 contacts (-21.5/contact) +
2D Compatibility (PS) -36271 + (NN) 591 + (LL) 180
1D Compatibility (HY) -16400 + (ID) 2350
Total energy: -109751.0 ( -42.49 by residue)
QMean score : 0.259
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