Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVE----GFVINT---------KEGQQTVLEEHIDCLSFFDY-----SEISILDAVASDPIFVALGYL-----------HLVQNEANIMAQ---FASADAEQAERIFERLNKRKQTESRRSNDK
2HW2 Chain:A ((6-143))
PKPFEVHESGAYLHGTKAELKVGDRLVPGRESNFEAGRIMNHIYITQTLDAAVWGAELAAGEGRGRIFIVEPEGAIEDDPNVTDKKLPGNPTRSYRTREPVWIVGELTDWVGHPPEQLAAMRQGLEELRRKGLAVIYD-
General information:
TITO was launched using:
RESULT:
Template:
2HW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21627 for 662 contacts (-32.7/contact) +
2D Compatibility (PS) -11205 + (NN) 1660 + (LL) 64
1D Compatibility (HY) 1200 + (ID) 650
Total energy: -30558.0 ( -46.16 by residue)
QMean score : 0.178
(partial model without unconserved sides chains):
PDB file :
Tito_2HW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HW2-query.scw
PDB file :
Tito_Scwrl_2HW2.pdb
: