Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTT--YNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
3F6O Chain:A ((5-81))
--------PEQLNGIFQALADPTRRAVLGRLS-RGPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQGRVRTCAIEKEPFTA-------------
General information:
TITO was launched using:
RESULT:
Template:
3F6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47258 for 486 contacts (-97.2/contact) +
2D Compatibility (PS) -7940 + (NN) -2268 + (LL) 1520
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -60046.0 ( -123.55 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3F6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6O-query.scw
PDB file :
Tito_Scwrl_3F6O.pdb
: