Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIE---------KLQEDMGFLFR
3FFL Chain:A ((21-166))
MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDK--EYRNAVSKYTMALQQKKALCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMLLANLYK
General information:
TITO was launched using:
RESULT:
Template:
3FFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29487 for 676 contacts (-43.6/contact) +
2D Compatibility (PS) -10468 + (NN) -5793 + (LL) 380
1D Compatibility (HY) 400 + (ID) 500
Total energy: -45468.0 ( -67.26 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3FFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FFL-query.scw
PDB file :
Tito_Scwrl_3FFL.pdb
: