Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLK-TATTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
3HV8 Chain:A ((20-262))
---VIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEH--QTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-ENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYD------
General information:
TITO was launched using:
RESULT:
Template:
3HV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110680 for 1905 contacts (-58.1/contact) +
2D Compatibility (PS) -25532 + (NN) -9092 + (LL) 736
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -158068.0 ( -82.98 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_3HV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HV8-query.scw
PDB file :
Tito_Scwrl_3HV8.pdb
: