Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------VKFDLENGYVVKADGEMLVGGKF--------VVFKDSMKNWEPPYENKKLSESEVQEIIQQVKQS----TNENTVQISFE---------------------------------------------------------------------- |
| 4MT5 Chain:A ((1-184)) | MQTAYVKYVDDTTGETLRQDDLHGYTDETIPYSTAEGIKKYEGDGYVLVSDG-FKPGTKFGVGTPTYEVHFKHGMTHTDA--TDKNAEQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDGNQADSKTFAAVPSPAVEGYTPNHQQINEFTVTPDSKDIVKTVVYVGDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3234 for 254 contacts (12.7/contact) +
2D Compatibility (PS) -6904 + (NN) 2214 + (LL) 56
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -4400.0 ( -17.32 by residue)
QMean score : 0.398
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