Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMET---WVPSVL----KSLDSKKLTVIDASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEG--AKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKL--EVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK |
| 4K3V Chain:B ((31-308)) | -----------------------------G---KLKVVTTNSILYDMAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETGNGWFEKALEQAGKSLKDKK--VIAVSKDVKPIY--------LNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFIDNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFGEVYTDSIG---KEGTKGDSYYKMMKSNIETVHGSM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57561 for 2244 contacts (-25.7/contact) +
2D Compatibility (PS) -29028 + (NN) -11639 + (LL) 3100
1D Compatibility (HY) -19200 + (ID) 4700
Total energy: -119028.0 ( -53.04 by residue)
QMean score : 0.523
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