Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYIDIANIGFKYESEPVLENISFQVSAGEFIILTGENGAAKSTLLRIILGILQPDKGSV---TFAKKNADGGRLL------TGYVPQQIASFNAGFPSTVLELVRSGRFPNGKWFK-RLTTKDHAHVEKALKSVEMWD----YRHKRIGELSGGQKQRICLARMFATDPDILILDEPQTAMDKQSKIRFYNLLKHEAQVHGKAILMVTHDSEEMEDFVDKHIRLIRKEDVSWKCFSMDLCKEPSKRP
3TIF Chain:A ((21-205))
------------------LKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQ---FNLIPLLTALENVE---LP--LIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77240 for 1250 contacts (-61.8/contact) +
2D Compatibility (PS) -18696 + (NN) -10153 + (LL) 3860
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: -116029.0 ( -92.82 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3TIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TIF-query.scw
PDB file :
Tito_Scwrl_3TIF.pdb
: