Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKNLYNYQEFIRLSHEGKIAYEQIDVPKNASLLTEKIDIDNHIYLVVDGYIALILNDGSQNSKIYSIQGKGTFLNYFTLLDQ-SNNHFNFKTLSGCSLYKYSKADMEYFLSM-----FPENFGFQFFIMKNQTTHVYFKS-LMASSPASEKLKTTFSNMALLHGVLSDDGTVILPQAIKTSHLLSYSNLSKSCFYKDLQYLKTTNQIEKKEKCWIIHDQALYTMIQNGQTSF
3IWZ Chain:A ((32-228))
-------------------AHSHRRRYPTRTDVFRPGDPA-GTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHP--QGTQLRVSRQELARLVGCSREMAGRVLKKLQADGLLHARGKTVVLYG--------------
General information:
TITO was launched using:
RESULT:
Template:
3IWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85259 for 1349 contacts (-63.2/contact) +
2D Compatibility (PS) -19933 + (NN) -1468 + (LL) 2124
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -111686.0 ( -82.79 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_3IWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWZ-query.scw
PDB file :
Tito_Scwrl_3IWZ.pdb
: