Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
3HPH Chain:A ((110-202))
----------FAPKSLQSDNGPAFVAESTQLLMKYLGIEHTTGIPWNPQSQALVERTHQTLKNTLEKLI----PMFNAFESALAGTLITLNI-KRKGGLG-TSPMDIFI---
General information:
TITO was launched using:
RESULT:
Template:
3HPH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142 for 496 contacts (-0.3/contact) +
2D Compatibility (PS) -9478 + (NN) -964 + (LL) 1800
1D Compatibility (HY) 2000 + (ID) 800
Total energy: -7584.0 ( -15.29 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_3HPH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HPH-query.scw
PDB file :
Tito_Scwrl_3HPH.pdb
: