Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATMKDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEIIVSNNPVRLEVHFKGKLILESHKIYPALQWYTDKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQYR--DQGTRTYIPMPFYHTNR---DYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMG-DIRSAVANYMKKTGKPAMVPVWALGPWMSSNNWDRESVVRNEVETTQELQIPSTVVVLEQ-WSDEATYYMFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEG---------------------------LQF-AD--GRRGDEMRNLYPNDYVEAYYQFAQ---QNEGMTFSRAGYTGAQNFPAHWAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGFNGDI-----PTAELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVSGPTLRKCKADKEEIPVFVRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKVYLDGDFTEEITDHLFGKWLVKVTENADEVIVSVQTNTASYEVEVIGTTKKVQIKKGR |
| 2G3M Chain:A ((53-633)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISVKDGVATGYFFNSASKVIFDVGLEEYDK--VIVTIPEDSVEFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYM----------------DSYKLFTWHP------YRFPEPKKLIDELHKRNVKLITIVDHGIRVDQ--NYSP------FLSGMGKFCEIESGELFV-GKMWPGTTVYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQFRDDRLVTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATD---GIDTEPVFLPD-----YYKEKVKEIVELRYKFLPYIYSLALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIVSKEE-SRLVTLPRGKWYNYWNGEIINGKSVV---KSTHELPIYLREGSIIPLEGD-------------------ELIVY--GETSFKRYDNAEITS--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207699 for 4778 contacts (-43.5/contact) +
2D Compatibility (PS) -56682 + (NN) -15122 + (LL) 41200
1D Compatibility (HY) -34800 + (ID) 6600
Total energy: -279703.0 ( -58.54 by residue)
QMean score : 0.410
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