Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAFLSIGTNIGERLENLNDALRGLAASNQINITNVSSVYETDAVGYEDQAAFLNIAVEIETDFPPIDLLDFCLALELELGRVRLF-KWGPRLIDIDVLLYDDVKTDTEKLKIPHPYMKERAFVMIPLIEISPEKSNLVENPALLEEQGVRKIKNQVNW
4F7V Chain:A ((3-134))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4F7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104814 for 990 contacts (-105.9/contact) +
2D Compatibility (PS) -14002 + (NN) -5459 + (LL) 2208
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -135667.0 ( -137.04 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_4F7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F7V-query.scw
PDB file :
Tito_Scwrl_4F7V.pdb
: