Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLE-RCGTGR--VVLVHDGARPFITLDIIDRLLIGVEQSKAAICAV-KVKDTVKRV-MNGVVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLG--TDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
3Q7U Chain:B ((14-229))
--------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG------HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
General information:
TITO was launched using:
RESULT:
Template:
3Q7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113703 for 1593 contacts (-71.4/contact) +
2D Compatibility (PS) -22714 + (NN) -8174 + (LL) 1612
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -161029.0 ( -101.09 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3Q7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q7U-query.scw
PDB file :
Tito_Scwrl_3Q7U.pdb
: